Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_101431 | Not Available | - | 511781 - 512242 | 16872.9 |
| c-5 sterol desaturase | SAMN04488101_101432 | Not Available | + | 512320 - 513084 | 30414.6 |
| peroxiredoxin | SAMN04488101_101433 | Not Available | + | 513113 - 514264 | 42318.2 |
| carboxyl-terminal processing protease | SAMN04488101_101434 | Not Available | + | 514387 - 516465 | 76597.5 |
| magnesium transporter | SAMN04488101_101435 | Not Available | + | 516690 - 518060 | 51077.0 |
| fkbp-type peptidyl-prolyl cis-trans isomerase fkpa | SAMN04488101_101436 | Not Available | - | 518135 - 518626 | 17467.9 |
| hypothetical protein | SAMN04488101_101437 | Not Available | - | 518647 - 519741 | 39929.8 |
| hypothetical protein | SAMN04488101_101438 | Not Available | + | 519842 - 520327 | 18032.3 |
| uncharacterized membrane protein | SAMN04488101_101439 | Not Available | - | 520308 - 521006 | 26388.1 |
| hypothetical protein | SAMN04488101_101440 | Not Available | - | 521003 - 521248 | 9298.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.