Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_101391 | Not Available | + | 458203 - 460074 | 70582.9 |
| l-ascorbate metabolism protein ulag, beta-lactamase superfamily | SAMN04488101_101392 | Not Available | + | 460097 - 460828 | 27011.8 |
| hypothetical protein | SAMN04488101_101393 | Not Available | - | 460902 - 462218 | 49918.2 |
| fad dependent oxidoreductase tigr03364 | SAMN04488101_101394 | Not Available | - | 462215 - 463417 | 45193.2 |
| aldehyde dehydrogenase (nad+) | SAMN04488101_101395 | Not Available | - | 463378 - 464826 | 52144.3 |
| phosphonoacetate hydrolase | SAMN04488101_101396 | Not Available | - | 464849 - 466090 | 45220.1 |
| starch-binding associating with outer membrane | SAMN04488101_101397 | Not Available | - | 466238 - 467728 | 55484.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_101398 | Not Available | - | 467740 - 470910 | 117207.0 |
| transcriptional regulator, xre family with cupin sensor | SAMN04488101_101399 | Not Available | - | 471163 - 471744 | 22035.7 |
| phosphoglycerate mutase | SAMN04488101_101400 | Not Available | + | 471936 - 473027 | 41436.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.