Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_1141 | Not Available | - | 4812358 - 4812481 | 4872.19 |
| hypothetical protein | SAMN04488101_1142 | Not Available | + | 4812824 - 4813099 | 10374.6 |
| dna helicase, putative | SAMN04488101_1143 | Not Available | - | 4813111 - 4815021 | 71157.3 |
| arylsulfatase a | SAMN04488101_1144 | Not Available | - | 4815059 - 4816588 | 57504.6 |
| d-lactate dehydrogenase | SAMN04488101_1145 | Not Available | - | 4816663 - 4819467 | 103346.0 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN04488101_1146 | Not Available | + | 4819739 - 4820167 | 16358.4 |
| gtp-binding protein | SAMN04488101_1147 | Not Available | - | 4820171 - 4821178 | 36250.6 |
| adenylate kinase | SAMN04488101_1148 | Not Available | - | 4821259 - 4821828 | 20937.1 |
| right handed beta helix region | SAMN04488101_1149 | Not Available | - | 4822162 - 4823730 | 56342.4 |
| nhl repeat-containing protein | SAMN04488101_11410 | Not Available | - | 4823812 - 4825122 | 45533.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.