Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_101381 | Not Available | + | 440947 - 444261 | 120237.0 |
| starch-binding associating with outer membrane | SAMN04488101_101382 | Not Available | + | 444284 - 445801 | 55392.6 |
| transcriptional regulator, gntr family | SAMN04488101_101383 | Not Available | + | 446045 - 446686 | 24634.9 |
| hypothetical protein | SAMN04488101_101384 | Not Available | + | 446807 - 448138 | 48846.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_101385 | Not Available | + | 448199 - 451252 | 110327.0 |
| susd family protein | SAMN04488101_101386 | Not Available | + | 451273 - 452760 | 55281.4 |
| hypothetical protein | SAMN04488101_101387 | Not Available | + | 452798 - 454924 | 79992.2 |
| 3-oxoacyl-[acyl-carrier-protein] reductase /acetoacetyl-coa reductase | SAMN04488101_101388 | Not Available | + | 454927 - 455670 | 26101.9 |
| sugar phosphate permease | SAMN04488101_101389 | Not Available | + | 455667 - 456929 | 46489.6 |
| galactonate dehydratase | SAMN04488101_101390 | Not Available | + | 457002 - 458168 | 43556.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.