Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribosome-associated protein | SAMN04488101_10125 | Not Available | + | 36072 - 36482 | 15426.9 |
| hypothetical protein | SAMN04488101_10126 | Not Available | - | 36513 - 37463 | 35033.1 |
| hypothetical protein | SAMN04488101_10127 | Not Available | - | 37520 - 38020 | 18230.6 |
| atp-dependent lon protease | SAMN04488101_10128 | Not Available | - | 38071 - 40542 | 92117.7 |
| tpr repeat-containing protein | SAMN04488101_10129 | Not Available | + | 40808 - 41434 | 23685.3 |
| hypothetical protein | SAMN04488101_10130 | Not Available | - | 41441 - 41968 | 20141.1 |
| phosphoglycerate mutase | SAMN04488101_10131 | Not Available | - | 41968 - 43488 | 55806.2 |
| protein of unknown function | SAMN04488101_10132 | Not Available | + | 43596 - 44021 | 16077.5 |
| nicotinate-nucleotide pyrophosphorylase | SAMN04488101_10133 | Not Available | + | 44058 - 44900 | 30677.0 |
| glycerol-3-phosphate acyltransferase plsy | SAMN04488101_10134 | Not Available | + | 44904 - 45551 | 23092.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.