Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | SAMN04488101_101371 | Not Available | + | 428893 - 430008 | 42882.7 |
| proline iminopeptidase | SAMN04488101_101372 | Not Available | + | 430151 - 431077 | 34861.2 |
| hypothetical protein | SAMN04488101_101373 | Not Available | + | 431100 - 431771 | 25236.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488101_101374 | Not Available | + | 431873 - 432508 | 24477.2 |
| fecr family protein | SAMN04488101_101375 | Not Available | + | 432589 - 433581 | 36948.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_101376 | Not Available | + | 433691 - 437158 | 126489.0 |
| starch-binding associating with outer membrane | SAMN04488101_101377 | Not Available | + | 437178 - 438857 | 63690.7 |
| hypothetical protein | SAMN04488101_101378 | Not Available | - | 438903 - 439073 | 6200.49 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488101_101379 | Not Available | + | 439219 - 439794 | 22624.6 |
| fecr family protein | SAMN04488101_101380 | Not Available | + | 439859 - 440926 | 39831.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.