Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_11231 | Not Available | - | 4522822 - 4523121 | 10655.3 |
| methylamine utilisation protein maue | SAMN04488101_11232 | Not Available | - | 4523253 - 4523708 | 16795.8 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488101_11233 | Not Available | - | 4523839 - 4524426 | 22846.6 |
| hypothetical protein | SAMN04488101_11234 | Not Available | - | 4524442 - 4524705 | 10148.5 |
| hypothetical protein | SAMN04488101_11235 | Not Available | - | 4524723 - 4525364 | 23756.8 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488101_11236 | Not Available | + | 4525725 - 4526414 | 26718.4 |
| hypothetical protein | SAMN04488101_11237 | Not Available | + | 4526437 - 4527369 | 36168.2 |
| hypothetical protein | SAMN04488101_11238 | Not Available | + | 4527711 - 4528532 | 31907.4 |
| hypothetical protein | SAMN04488101_11239 | Not Available | + | 4528584 - 4528709 | 4620.68 |
| hypothetical protein | SAMN04488101_11240 | Not Available | - | 4528764 - 4530413 | 60642.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.