Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488101_101351 | Not Available | + | 400443 - 401144 | 26161.8 |
| protein of unknown function | SAMN04488101_101352 | Not Available | + | 401228 - 402589 | 50660.0 |
| oxidoreductase family, nad-binding rossmann fold | SAMN04488101_101353 | Not Available | + | 402633 - 404060 | 53037.9 |
| hypothetical protein | SAMN04488101_101354 | Not Available | - | 404423 - 404776 | 13527.9 |
| hypothetical protein | SAMN04488101_101355 | Not Available | + | 404894 - 405112 | 7817.24 |
| hypothetical protein | SAMN04488101_101356 | Not Available | - | 405543 - 405821 | 9916.14 |
| polygalacturonase | SAMN04488101_101357 | Not Available | + | 406063 - 407691 | 59293.6 |
| hypothetical protein | SAMN04488101_101358 | Not Available | + | 407718 - 408152 | 16778.3 |
| hypothetical protein | SAMN04488101_101359 | Not Available | - | 408169 - 410085 | 72085.9 |
| starch-binding associating with outer membrane | SAMN04488101_101360 | Not Available | - | 410112 - 411581 | 54489.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.