Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_101341 | Not Available | + | 385896 - 386594 | 26446.9 |
| protein of unknown function | SAMN04488101_101342 | Not Available | + | 386601 - 387314 | 27802.9 |
| hypothetical protein | SAMN04488101_101343 | Not Available | + | 387414 - 387977 | 21265.9 |
| protein of unknown function | SAMN04488101_101344 | Not Available | + | 387989 - 389521 | 59178.4 |
| f5/8 type c domain-containing protein | SAMN04488101_101345 | Not Available | + | 389974 - 391530 | 57209.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488101_101346 | Not Available | + | 391719 - 392318 | 23199.6 |
| fecr family protein | SAMN04488101_101347 | Not Available | + | 392424 - 393617 | 44592.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_101348 | Not Available | + | 393914 - 397249 | 124387.0 |
| starch-binding associating with outer membrane | SAMN04488101_101349 | Not Available | + | 397261 - 399165 | 72245.6 |
| protein of unknown function | SAMN04488101_101350 | Not Available | + | 399191 - 400423 | 46866.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.