Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_101331 | Not Available | - | 370246 - 373512 | 118199.0 |
| fecr family protein | SAMN04488101_101332 | Not Available | - | 373750 - 374496 | 27592.1 |
| hypothetical protein | SAMN04488101_101333 | Not Available | - | 374644 - 374895 | 10178.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488101_101334 | Not Available | - | 375053 - 375652 | 22984.2 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN04488101_101335 | Not Available | - | 375736 - 378036 | 85659.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488101_101336 | Not Available | + | 378226 - 378819 | 23334.3 |
| fecr family protein | SAMN04488101_101337 | Not Available | + | 378898 - 380049 | 42913.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_101338 | Not Available | + | 380257 - 383853 | 131102.0 |
| susd family protein | SAMN04488101_101339 | Not Available | + | 383913 - 385349 | 53353.2 |
| hypothetical protein | SAMN04488101_101340 | Not Available | + | 385370 - 385882 | 19237.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.