Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_101321 | Not Available | + | 362523 - 362816 | 10865.2 |
| protein of unknown function | SAMN04488101_101322 | Not Available | + | 363148 - 363525 | 14135.9 |
| spermine/spermidine n-acetyltransferase | SAMN04488101_101323 | Not Available | + | 363687 - 364205 | 20162.8 |
| pas domain s-box-containing protein | SAMN04488101_101324 | Not Available | + | 364370 - 365350 | 37897.2 |
| hypothetical protein | SAMN04488101_101325 | Not Available | - | 365499 - 365729 | 8835.07 |
| phosphate transporter family protein | SAMN04488101_101326 | Not Available | + | 365792 - 366316 | 18534.0 |
| hypothetical protein | SAMN04488101_101327 | Not Available | - | 366623 - 366961 | 11867.9 |
| hypothetical protein | SAMN04488101_101328 | Not Available | + | 367078 - 367398 | 12025.3 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488101_101329 | Not Available | - | 367507 - 368670 | 43456.4 |
| starch-binding associating with outer membrane | SAMN04488101_101330 | Not Available | - | 368764 - 370227 | 53647.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.