Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ssu ribosomal protein s1p | SAMN04488101_10115 | Not Available | - | 20154 - 22127 | 72978.6 |
| uncharacterized iron-regulated membrane protein | SAMN04488101_10116 | Not Available | + | 22471 - 23871 | 51700.3 |
| transcriptional regulator glxa family, contains an amidase domain and an arac-type dna-binding hth domain | SAMN04488101_10117 | Not Available | - | 23852 - 24826 | 36376.5 |
| uncharacterized iron-regulated membrane protein | SAMN04488101_10118 | Not Available | - | 24888 - 26060 | 44230.0 |
| iron complex outermembrane recepter protein | SAMN04488101_10119 | Not Available | - | 26069 - 28447 | 87954.5 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN04488101_10120 | Not Available | - | 28671 - 30074 | 51202.9 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN04488101_10121 | Not Available | - | 30085 - 33261 | 114717.0 |
| membrane fusion protein, multidrug efflux system | SAMN04488101_10122 | Not Available | - | 33301 - 34467 | 41758.2 |
| transcriptional regulator, tetr family | SAMN04488101_10123 | Not Available | - | 34569 - 35156 | 22848.6 |
| cytidylate kinase | SAMN04488101_10124 | Not Available | - | 35313 - 35990 | 25643.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.