Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_101262 | Not Available | - | 282913 - 283632 | 26395.4 |
| hypothetical protein | SAMN04488101_101263 | Not Available | - | 283634 - 284149 | 19229.0 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488101_101264 | Not Available | - | 284153 - 285691 | 58157.1 |
| susd family protein | SAMN04488101_101265 | Not Available | - | 285712 - 287079 | 51441.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488101_101266 | Not Available | - | 287107 - 290613 | 130420.0 |
| fecr family protein | SAMN04488101_101267 | Not Available | - | 290756 - 291925 | 43495.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488101_101268 | Not Available | - | 292054 - 292647 | 23194.9 |
| hypothetical protein | SAMN04488101_101269 | Not Available | - | 292717 - 293097 | 14690.4 |
| hypothetical protein | SAMN04488101_101270 | Not Available | + | 293536 - 293706 | 5884.05 |
| mobilisation protein (mobc) | SAMN04488101_101271 | Not Available | + | 293706 - 294116 | 15682.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.