Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| subtilase family protein | SAMN04488101_101222 | Not Available | - | 228362 - 229810 | 52557.9 |
| hypothetical protein | SAMN04488101_101223 | Not Available | - | 229827 - 231065 | 46783.3 |
| hypothetical protein | SAMN04488101_101224 | Not Available | - | 231072 - 232190 | 42283.4 |
| hypothetical protein | SAMN04488101_101225 | Not Available | - | 232196 - 232486 | 10731.6 |
| d-alanyl-d-alanine carboxypeptidase | SAMN04488101_101226 | Not Available | + | 232778 - 233467 | 25813.2 |
| two component transcriptional regulator, lyttr family | SAMN04488101_101227 | Not Available | - | 233485 - 234198 | 26821.0 |
| hypothetical protein | SAMN04488101_101228 | Not Available | + | 234388 - 236271 | 67002.1 |
| hypothetical protein | SAMN04488101_101229 | Not Available | + | 236290 - 237075 | 28779.7 |
| hypothetical protein | SAMN04488101_101230 | Not Available | + | 237107 - 239272 | 80146.8 |
| hypothetical protein | SAMN04488101_101231 | Not Available | + | 239272 - 242538 | 124688.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.