Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488101_101182 | Not Available | + | 184491 - 185408 | 34226.8 |
| transporter, sss family | SAMN04488101_101183 | Not Available | + | 185418 - 187106 | 61366.8 |
| fad dependent oxidoreductase | SAMN04488101_101184 | Not Available | + | 187142 - 189421 | 84477.0 |
| type i restriction enzyme r protein n terminus (hsdr_n) | SAMN04488101_101185 | Not Available | - | 189572 - 190033 | 17806.0 |
| double zinc ribbon | SAMN04488101_101186 | Not Available | - | 190060 - 190458 | 14752.5 |
| uncharacterized membrane protein yckc, rdd family | SAMN04488101_101187 | Not Available | - | 190482 - 191093 | 22126.4 |
| dna polymerase iii, delta subunit | SAMN04488101_101188 | Not Available | + | 191158 - 192183 | 38957.2 |
| quaternary ammonium compound-resistance protein suge | SAMN04488101_101189 | Not Available | - | 192273 - 192695 | 15211.1 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488101_101190 | Not Available | - | 192707 - 193273 | 22093.6 |
| protein of unknown function | SAMN04488101_101191 | Not Available | + | 193408 - 194334 | 35155.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.