Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_10329 | Not Available | + | 1966198 - 1966839 | 23675.8 |
| hypothetical protein | SAMN04488101_10330 | Not Available | + | 1966836 - 1967234 | 15086.4 |
| hypothetical protein | SAMN04488101_10331 | Not Available | + | 1967255 - 1967467 | 8073.46 |
| hypothetical protein | SAMN04488101_10332 | Not Available | + | 1967454 - 1968101 | 23919.8 |
| hypothetical protein | SAMN04488101_10333 | Not Available | + | 1968521 - 1969084 | 21081.3 |
| hypothetical protein | SAMN04488101_10334 | Not Available | + | 1969111 - 1969461 | 13733.7 |
| hypothetical protein | SAMN04488101_10335 | Not Available | + | 1969554 - 1970246 | 25460.5 |
| protein involved in polysaccharide export, contains slbb domain of the beta-grasp fold | SAMN04488101_10336 | Not Available | + | 1970370 - 1972844 | 90775.7 |
| chain length determinant protein | SAMN04488101_10337 | Not Available | + | 1972899 - 1973987 | 40445.4 |
| udp-n-acetyl-d-galactosamine dehydrogenase | SAMN04488101_10338 | Not Available | + | 1973980 - 1975269 | 47578.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.