Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter nyackensis
Accession NumberFWYB00000000.1
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488101_102382 | Not Available | - | 1463633 - 1464127 | 16937.8 |
| glucose-6-phosphate isomerase | SAMN04488101_102383 | Not Available | + | 1464188 - 1465834 | 61561.2 |
| protein of unknown function | SAMN04488101_102384 | Not Available | + | 1465984 - 1466523 | 19884.9 |
| glutamine cyclotransferase | SAMN04488101_102385 | Not Available | - | 1466596 - 1467690 | 40698.6 |
| putative endonuclease | SAMN04488101_102386 | Not Available | - | 1467671 - 1468033 | 13934.4 |
| dna primase | SAMN04488101_102387 | Not Available | - | 1468036 - 1470036 | 74870.1 |
| hypothetical protein | SAMN04488101_102388 | Not Available | - | 1470055 - 1471008 | 37022.5 |
| amidohydrolase | SAMN04488101_102389 | Not Available | - | 1471008 - 1472192 | 43271.1 |
| sporulation related domain-containing protein | SAMN04488101_102390 | Not Available | - | 1472185 - 1472640 | 17064.8 |
| protein translocase subunit seca | SAMN04488101_102391 | Not Available | - | 1472709 - 1476017 | 124178.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.