Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter duraquae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter duraquae str. DSM 19034
Accession NumberSNWM00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4647 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atpase family protein associated with various cellular activities (aaa) | CLV32_0008 | Not Available | + | 5105 - 6100 | 37361.5 |
| subtilase family protein | CLV32_0009 | Not Available | + | 6118 - 8628 | 94331.1 |
| hypothetical protein | CLV32_0010 | Not Available | - | 8943 - 10064 | 43841.2 |
| uncharacterized protein (tigr04141 family) | CLV32_0012 | Not Available | - | 10716 - 12503 | 68688.2 |
| superfamily ii dna or rna helicase | CLV32_0013 | Not Available | - | 12667 - 15681 | 114102.0 |
| quercetin dioxygenase-like cupin family protein | CLV32_0014 | Not Available | - | 16607 - 17095 | 17842.3 |
| diketogulonate reductase-like aldo/keto reductase | CLV32_0015 | Not Available | - | 17100 - 17942 | 31787.1 |
| cyclophilin-like | CLV32_0016 | Not Available | - | 17955 - 18428 | 16786.0 |
| alcohol dehydrogenase (nadp+)/uncharacterized zinc-type alcohol dehydrogenase-like protein | CLV32_0017 | Not Available | - | 18440 - 19621 | 42888.8 |
| acetyltransferase-like isoleucine patch superfamily enzyme | CLV32_0018 | Not Available | - | 19633 - 20205 | 20657.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.