Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter duraquae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter duraquae str. DSM 19034
Accession NumberSNWM00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4647 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator/antitoxin higa | CLV32_4704 | Not Available | + | 5250115 - 5250519 | 15417.7 |
| comf family protein | CLV32_4705 | Not Available | - | 5250681 - 5251379 | 25921.8 |
| 23s rrna m(2)a-2503 methyltransferase | CLV32_4706 | Not Available | - | 5251417 - 5252484 | 40181.1 |
| ribosomal large subunit pseudouridine synthase f | CLV32_4707 | Not Available | - | 5252515 - 5253504 | 36113.6 |
| putative damage-inducible protein dinb | CLV32_4708 | Not Available | - | 5253585 - 5254085 | 19117.8 |
| fkbm family methyltransferase | CLV32_4709 | Not Available | - | 5254159 - 5255031 | 31999.6 |
| hth domain-containing protein | CLV32_4710 | Not Available | - | 5255042 - 5255731 | 26126.6 |
| murein dd-endopeptidase mepm/ murein hydrolase activator nlpd | CLV32_4711 | Not Available | - | 5255783 - 5257120 | 48640.2 |
| cupin domain-containing protein | CLV32_4712 | Not Available | + | 5257230 - 5257898 | 24418.1 |
| cytosine/adenosine deaminase-related metal-dependent hydrolase | CLV32_4713 | Not Available | + | 5257936 - 5259105 | 42361.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.