Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter duraquae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1553518 bp
Thymine Count
1550797 bp
Guanine Count
1084215 bp
Cytosine Count
1099733 bp
Genome Length
5288263 bp
Protein-coding Genes
4647 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protease-4 | CLV32_1733 | Not Available | + | 1966207 - 1967976 | 65238.7 |
| dna polymerase (family 10) | CLV32_1734 | Not Available | + | 1967993 - 1969690 | 63324.4 |
| uncharacterized protein duf4254 | CLV32_1735 | Not Available | + | 1969671 - 1970273 | 23461.8 |
| adp-heptose:lps heptosyltransferase | CLV32_1736 | Not Available | + | 1970277 - 1971278 | 37696.3 |
| phosphohistidine phosphatase sixa | CLV32_1737 | Not Available | + | 1971271 - 1971783 | 18698.2 |
| amp nucleosidase | CLV32_1738 | Not Available | - | 1971814 - 1972677 | 31927.9 |
| atp-dependent clp protease atp-binding subunit clpx | CLV32_1739 | Not Available | - | 1972771 - 1974012 | 46124.9 |
| atp-dependent clp protease protease subunit | CLV32_1740 | Not Available | - | 1974017 - 1974706 | 25499.7 |
| trigger factor | CLV32_1741 | Not Available | - | 1974865 - 1976211 | 51014.6 |
| Trna-leu | Not Available | Not Available | + | 1976279 - 1976363 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
