Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter duraquae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter duraquae str. DSM 19034
Accession NumberSNWM00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4647 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetyl esterase/lipase | CLV32_0118 | Not Available | - | 100960 - 101886 | 33883.6 |
| aerobic c4-dicarboxylate transport protein | CLV32_0119 | Not Available | - | 101957 - 103198 | 43993.9 |
| putative outer membrane starch-binding protein | CLV32_0120 | Not Available | - | 103310 - 105091 | 67376.6 |
| tonb-linked susc/raga family outer membrane protein | CLV32_0121 | Not Available | - | 105108 - 108164 | 112890.0 |
| hypothetical protein | CLV32_0122 | Not Available | + | 108706 - 109863 | 44654.5 |
| cubico group peptidase (beta-lactamase class c family) | CLV32_0123 | Not Available | + | 110310 - 111713 | 51541.6 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | CLV32_0124 | Not Available | - | 111724 - 112539 | 29953.7 |
| hxlr family transcriptional regulator | CLV32_0125 | Not Available | + | 112609 - 113013 | 15418.9 |
| marr family protein | CLV32_0126 | Not Available | - | 113037 - 113519 | 18435.7 |
| acetyltransferase (gnat) family protein | CLV32_0127 | Not Available | - | 113529 - 114029 | 18898.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.