Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein, contains parb-like and hnh nuclease domains | SAMN04489864_11714 | Not Available | - | 4368265 - 4369962 | 65950.7 |
| toxin syme, type i toxin-antitoxin system | SAMN04489864_11715 | Not Available | + | 4370379 - 4370525 | 5626.92 |
| hypothetical protein | SAMN04489864_11716 | Not Available | - | 4370723 - 4371139 | 15870.8 |
| hypothetical protein | SAMN04489864_1181 | Not Available | + | 4371465 - 4371709 | 9581.69 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04489864_1183 | Not Available | + | 4371889 - 4372470 | 22558.3 |
| fecr protein | SAMN04489864_1184 | Not Available | + | 4372566 - 4373708 | 41788.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04489864_1185 | Not Available | + | 4373832 - 4377449 | 135623.0 |
| susd family protein | SAMN04489864_1186 | Not Available | + | 4377472 - 4378860 | 52923.6 |
| ahpc/tsa family protein | SAMN04489864_1187 | Not Available | + | 4378898 - 4380529 | 62215.9 |
| helix-turn-helix domain-containing protein | SAMN04489864_1188 | Not Available | + | 4381008 - 4381298 | 11515.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.