Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative oligopeptide transporter, opt family | SAMN04489864_11578 | Not Available | + | 4333724 - 4335778 | 71905.7 |
| beta-glucosidase | SAMN04489864_11579 | Not Available | - | 4335939 - 4338206 | 83655.0 |
| hypothetical protein | SAMN04489864_11580 | Not Available | + | 4338395 - 4339033 | 23533.4 |
| Trna-lys | Not Available | Not Available | + | 4339154 - 4339226 | Not Available |
| site-specific recombinase xerd | SAMN04489864_11582 | Not Available | + | 4339475 - 4340692 | 46505.6 |
| orf6n domain-containing protein | SAMN04489864_11583 | Not Available | + | 4340764 - 4341114 | 13398.2 |
| peroxiredoxin | SAMN04489864_1162 | Not Available | - | 4341999 - 4343570 | 60258.7 |
| susd family protein | SAMN04489864_1163 | Not Available | - | 4343653 - 4345014 | 52078.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04489864_1164 | Not Available | - | 4345099 - 4348554 | 128639.0 |
| fecr protein | SAMN04489864_1165 | Not Available | - | 4348788 - 4349930 | 42511.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.