Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04489864_11557 | Not Available | + | 4311081 - 4312097 | 38788.7 |
| thiol-disulfide isomerase or thioredoxin | SAMN04489864_11558 | Not Available | - | 4312098 - 4312820 | 27577.5 |
| 3-dehydroquinate dehydratase | SAMN04489864_11559 | Not Available | - | 4312825 - 4313241 | 15326.3 |
| integrase/recombinase xerd | SAMN04489864_11560 | Not Available | + | 4313312 - 4314202 | 33474.6 |
| release factor glutamine methyltransferase | SAMN04489864_11561 | Not Available | - | 4314220 - 4315095 | 33237.5 |
| diaminohydroxyphosphoribosylaminopyrimidine deaminase | SAMN04489864_11562 | Not Available | + | 4315159 - 4316211 | 39239.6 |
| eama-like transporter family protein | SAMN04489864_11563 | Not Available | + | 4316208 - 4317077 | 32459.3 |
| uncharacterized protein, yigz family | SAMN04489864_11564 | Not Available | + | 4317064 - 4317678 | 23090.1 |
| uridine phosphorylase | SAMN04489864_11565 | Not Available | + | 4317775 - 4318638 | 31592.2 |
| uncharacterized conserved protein ybcv, duf1398 family | SAMN04489864_11566 | Not Available | - | 4318642 - 4319034 | 14719.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.