Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lipid kinase, yegs/rv2252/bmru family | SAMN04489864_101159 | Not Available | + | 173459 - 174343 | 32011.2 |
| translation initiation factor 1 | SAMN04489864_101160 | Not Available | + | 174357 - 174713 | 13059.7 |
| phosphoenolpyruvate carboxykinase (atp) | SAMN04489864_101161 | Not Available | + | 174847 - 176451 | 59006.3 |
| outer membrane transport energization protein exbb | SAMN04489864_101162 | Not Available | + | 176748 - 177629 | 30889.8 |
| biopolymer transport protein exbd/tolr | SAMN04489864_101163 | Not Available | + | 177714 - 178331 | 22876.9 |
| biopolymer transport protein exbd | SAMN04489864_101164 | Not Available | + | 178338 - 178883 | 19836.2 |
| outer membrane transport energization protein tonb | SAMN04489864_101165 | Not Available | + | 178913 - 179737 | 30463.8 |
| hypothetical protein | SAMN04489864_101166 | Not Available | + | 179740 - 179976 | 9081.43 |
| phosphate abc transporter substrate-binding protein, phot family | SAMN04489864_101167 | Not Available | + | 179977 - 180870 | 33277.2 |
| tetratricopeptide repeat-containing protein | SAMN04489864_101168 | Not Available | + | 181037 - 182752 | 63520.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.