Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04489864_102408 | Not Available | + | 1080891 - 1080980 | 3398.0 |
| pas domain s-box-containing protein | SAMN04489864_102409 | Not Available | + | 1080919 - 1082541 | 61376.4 |
| two-component system, chemotaxis family, response regulator cheb | SAMN04489864_102410 | Not Available | + | 1082546 - 1083526 | 36069.9 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN04489864_102411 | Not Available | + | 1083550 - 1084197 | 23894.3 |
| uncharacterized damage-inducible protein dinb (forms a four-helix bundle) | SAMN04489864_102412 | Not Available | + | 1084248 - 1084766 | 19793.4 |
| oxidoreductase family, nad-binding rossmann fold | SAMN04489864_102413 | Not Available | - | 1084776 - 1086194 | 52388.3 |
| ig-like domain (group 4) | SAMN04489864_102414 | Not Available | + | 1086350 - 1089358 | 111648.0 |
| hypothetical protein | SAMN04489864_102415 | Not Available | - | 1089414 - 1089545 | 5269.62 |
| glucose/galactose transporter | SAMN04489864_102416 | Not Available | + | 1089621 - 1090985 | 50438.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04489864_102417 | Not Available | + | 1091162 - 1094272 | 113101.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.