Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN04489864_102378 | Not Available | + | 1042904 - 1045906 | 109709.0 |
| starch-binding associating with outer membrane | SAMN04489864_102379 | Not Available | + | 1045893 - 1047605 | 64333.0 |
| hypothetical protein | SAMN04489864_102380 | Not Available | + | 1048040 - 1048255 | 8433.54 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04489864_102381 | Not Available | + | 1048262 - 1051390 | 114543.0 |
| starch-binding associating with outer membrane | SAMN04489864_102382 | Not Available | + | 1051426 - 1052964 | 58359.5 |
| hypothetical protein | SAMN04489864_102383 | Not Available | + | 1052954 - 1053757 | 29609.6 |
| arac-type dna-binding protein | SAMN04489864_102384 | Not Available | - | 1053892 - 1054770 | 33610.6 |
| mfs transporter, fhs family, l-fucose permease | SAMN04489864_102385 | Not Available | + | 1055005 - 1056255 | 46038.6 |
| l-rhamnose mutarotase | SAMN04489864_102386 | Not Available | + | 1056258 - 1056587 | 12992.7 |
| altronate hydrolase | SAMN04489864_102387 | Not Available | + | 1056589 - 1058256 | 59623.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.