Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04489864_102338 | Not Available | + | 1003141 - 1003524 | 14732.7 |
| arac-type dna-binding protein | SAMN04489864_102339 | Not Available | + | 1003531 - 1004406 | 34659.4 |
| putative oxidoreductase | SAMN04489864_102340 | Not Available | - | 1004396 - 1004797 | 14783.7 |
| hypothetical protein | SAMN04489864_102341 | Not Available | - | 1004825 - 1005325 | 18864.0 |
| membrane protein | SAMN04489864_102342 | Not Available | - | 1005331 - 1005717 | 13428.2 |
| hypothetical protein | SAMN04489864_102343 | Not Available | - | 1005745 - 1006257 | 18688.2 |
| trypsin-like peptidase domain-containing protein | SAMN04489864_102344 | Not Available | - | 1006364 - 1007398 | 37784.5 |
| acetyltransferase (gnat) family protein | SAMN04489864_102345 | Not Available | + | 1007552 - 1008067 | 18828.9 |
| type i phosphodiesterase / nucleotide pyrophosphatase | SAMN04489864_102346 | Not Available | + | 1008149 - 1009807 | 61418.6 |
| cytochrome c | SAMN04489864_102347 | Not Available | + | 1009857 - 1010858 | 36904.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.