Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04489864_102328 | Not Available | + | 989417 - 989674 | 10094.5 |
| arac-type dna-binding protein | SAMN04489864_102329 | Not Available | + | 990153 - 990725 | 22032.7 |
| cu2+-exporting atpase | SAMN04489864_102330 | Not Available | + | 990805 - 993219 | 87155.7 |
| copper chaperone copz | SAMN04489864_102331 | Not Available | + | 993257 - 993484 | 8301.94 |
| multicopper oxidase with three cupredoxin domains (includes cell division protein ftsp and spore coat protein cota) | SAMN04489864_102332 | Not Available | + | 993541 - 995793 | 86089.7 |
| hypothetical protein | SAMN04489864_102333 | Not Available | + | 995859 - 996053 | 7233.81 |
| protein of unknown function | SAMN04489864_102334 | Not Available | - | 996310 - 997290 | 34982.7 |
| starch-binding associating with outer membrane | SAMN04489864_102335 | Not Available | - | 997316 - 998896 | 56963.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04489864_102336 | Not Available | - | 998909 - 1002034 | 112717.0 |
| arac-type dna-binding protein | SAMN04489864_102337 | Not Available | + | 1002237 - 1003055 | 31953.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.