Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04489864_102318 | Not Available | - | 976750 - 977286 | 21017.8 |
| regulator of protease activity hflc, stomatin/prohibitin superfamily | SAMN04489864_102319 | Not Available | - | 977287 - 978144 | 31434.3 |
| hypothetical protein | SAMN04489864_102320 | Not Available | + | 978344 - 980353 | 76718.5 |
| Trna-ser | Not Available | Not Available | + | 980418 - 980504 | Not Available |
| Trna-pro | Not Available | Not Available | + | 980556 - 980632 | Not Available |
| site-specific recombinase xerd | SAMN04489864_102323 | Not Available | + | 981044 - 982297 | 48450.7 |
| erythromycin esterase homolog | SAMN04489864_102324 | Not Available | - | 982889 - 984163 | 49067.0 |
| hypothetical protein | SAMN04489864_102325 | Not Available | + | 984585 - 984797 | 7742.27 |
| outer membrane protein beta-barrel family protein | SAMN04489864_102326 | Not Available | - | 985324 - 988140 | 106058.0 |
| hypothetical protein | SAMN04489864_102327 | Not Available | - | 988144 - 989355 | 47107.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.