Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| anthranilate synthase component 2 | SAMN04489864_10178 | Not Available | + | 82305 - 82889 | 21382.7 |
| indole-3-glycerol phosphate synthase | SAMN04489864_10179 | Not Available | + | 83006 - 83788 | 28774.7 |
| hypothetical protein | SAMN04489864_10180 | Not Available | - | 83801 - 83920 | 4464.49 |
| hypothetical protein | SAMN04489864_10181 | Not Available | - | 84150 - 84704 | 20535.5 |
| gtp-binding protein hflx | SAMN04489864_10182 | Not Available | + | 84866 - 86065 | 45702.2 |
| alginate lyase | SAMN04489864_10183 | Not Available | + | 86074 - 87174 | 41284.2 |
| ribosome-binding factor a | SAMN04489864_10184 | Not Available | + | 87180 - 87566 | 14565.2 |
| hemolysin iii | SAMN04489864_10185 | Not Available | + | 87553 - 88227 | 25383.6 |
| peptidase family m23 | SAMN04489864_10186 | Not Available | + | 88239 - 88943 | 26455.0 |
| tonb family c-terminal domain-containing protein | SAMN04489864_10187 | Not Available | + | 89192 - 89842 | 23996.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.