Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04489864_102308 | Not Available | + | 966922 - 967614 | 26106.3 |
| cystathionine gamma-lyase | SAMN04489864_102309 | Not Available | + | 967637 - 968776 | 41865.2 |
| tigr02757 family protein | SAMN04489864_102310 | Not Available | + | 968831 - 969679 | 32829.2 |
| bacteriocin-protection, ydei or ompd-associated | SAMN04489864_102311 | Not Available | + | 969783 - 970298 | 19427.8 |
| dolichol-phosphate mannosyltransferase | SAMN04489864_102312 | Not Available | - | 970273 - 970995 | 27706.8 |
| proton-dependent oligopeptide transporter, pot family | SAMN04489864_102313 | Not Available | - | 971087 - 972667 | 57852.9 |
| proton-dependent oligopeptide transporter, pot family | SAMN04489864_102314 | Not Available | - | 972739 - 974400 | 61317.0 |
| hypothetical protein | SAMN04489864_102315 | Not Available | - | 974421 - 975323 | 34331.1 |
| acetyl-coa c-acetyltransferase | SAMN04489864_102316 | Not Available | - | 975344 - 976522 | 40899.9 |
| hypothetical protein | SAMN04489864_102317 | Not Available | - | 976581 - 976766 | 7178.75 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.