Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative abc transport system permease protein | SAMN04489864_102288 | Not Available | + | 945946 - 947190 | 46250.4 |
| aspartate aminotransferase | SAMN04489864_102289 | Not Available | - | 947237 - 948433 | 44112.8 |
| cation diffusion facilitator family transporter | SAMN04489864_102290 | Not Available | + | 948547 - 949524 | 36231.2 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN04489864_102291 | Not Available | + | 949521 - 949961 | 16979.0 |
| hypothetical protein | SAMN04489864_102292 | Not Available | + | 949954 - 950790 | 30959.4 |
| adenosylmethionine-8-amino-7-oxononanoate aminotransferase | SAMN04489864_102293 | Not Available | + | 950787 - 952055 | 47282.2 |
| hypothetical protein | SAMN04489864_102294 | Not Available | + | 952045 - 952665 | 24053.8 |
| hypothetical protein | SAMN04489864_102295 | Not Available | - | 952704 - 953807 | 39488.2 |
| hypothetical protein | SAMN04489864_102296 | Not Available | - | 953822 - 954595 | 29305.6 |
| rna polymerase, sigma subunit, sigw | SAMN04489864_102297 | Not Available | - | 954588 - 955196 | 23667.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.