Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04489864_102278 | Not Available | + | 938133 - 939065 | 35847.7 |
| peptide/nickel transport system atp-binding protein | SAMN04489864_102279 | Not Available | - | 939073 - 940776 | 63982.7 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | SAMN04489864_102280 | Not Available | + | 940856 - 941581 | 28087.5 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit c | SAMN04489864_102281 | Not Available | + | 941578 - 941874 | 11278.6 |
| putative abc transport system atp-binding protein | SAMN04489864_102282 | Not Available | + | 941987 - 942745 | 27710.4 |
| cob(i)alamin adenosyltransferase | SAMN04489864_102283 | Not Available | + | 942750 - 943298 | 20537.9 |
| protein of unknown function | SAMN04489864_102284 | Not Available | + | 943384 - 943605 | 8587.66 |
| hypothetical protein | SAMN04489864_102285 | Not Available | + | 943716 - 943868 | 5353.05 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | SAMN04489864_102286 | Not Available | - | 943918 - 944583 | 25027.5 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | SAMN04489864_102287 | Not Available | - | 944654 - 945703 | 39725.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.