Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin reductase (nadph) | SAMN04489864_102258 | Not Available | + | 916896 - 917864 | 35029.8 |
| hexosaminidase | SAMN04489864_102259 | Not Available | + | 917893 - 919878 | 73836.4 |
| hypothetical protein | SAMN04489864_102260 | Not Available | + | 919918 - 920517 | 22561.0 |
| protein of unknown function | SAMN04489864_102261 | Not Available | - | 920526 - 921086 | 22041.2 |
| hypothetical protein | SAMN04489864_102262 | Not Available | - | 921120 - 921716 | 23045.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04489864_102263 | Not Available | - | 921703 - 922293 | 23235.8 |
| proton glutamate symport protein | SAMN04489864_102264 | Not Available | + | 922328 - 923911 | 57206.5 |
| hypothetical protein | SAMN04489864_102265 | Not Available | + | 923908 - 924420 | 19969.9 |
| hypothetical protein | SAMN04489864_102266 | Not Available | + | 924430 - 924927 | 19047.7 |
| predicted transcriptional regulator | SAMN04489864_102267 | Not Available | + | 924986 - 925348 | 13927.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.