Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| response regulator receiver domain-containing protein | SAMN04489864_102248 | Not Available | + | 905214 - 905579 | 13608.7 |
| hypothetical protein | SAMN04489864_102249 | Not Available | + | 905576 - 906637 | 40650.9 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN04489864_102250 | Not Available | + | 906634 - 908064 | 54578.2 |
| uncharacterized sulfatase | SAMN04489864_102251 | Not Available | + | 908076 - 910100 | 76734.6 |
| hypothetical protein | SAMN04489864_102252 | Not Available | - | 910088 - 911191 | 42860.3 |
| outer membrane protein, yaio family | SAMN04489864_102253 | Not Available | - | 911261 - 912502 | 47474.6 |
| hypothetical protein | SAMN04489864_102254 | Not Available | - | 912572 - 913282 | 27860.8 |
| acetyl-coa carboxylase, carboxyltransferase component | SAMN04489864_102255 | Not Available | + | 913396 - 915024 | 59064.4 |
| hypothetical protein | SAMN04489864_102256 | Not Available | + | 915042 - 915635 | 22502.0 |
| membrane dipeptidase | SAMN04489864_102257 | Not Available | + | 915635 - 916807 | 43246.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.