Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| carboxypeptidase regulatory-like domain-containing protein | SAMN04489864_102238 | Not Available | - | 891472 - 894291 | 105694.0 |
| hypothetical protein | SAMN04489864_102239 | Not Available | - | 894295 - 895536 | 47642.0 |
| de-hypoxanthine futalosine cyclase | SAMN04489864_102240 | Not Available | - | 895602 - 896726 | 42030.5 |
| predicted zn-dependent peptidase | SAMN04489864_102241 | Not Available | + | 896857 - 898095 | 46789.8 |
| predicted zn-dependent peptidase | SAMN04489864_102242 | Not Available | + | 898088 - 899368 | 48357.4 |
| acetyltransferase (gnat) domain-containing protein | SAMN04489864_102243 | Not Available | + | 899384 - 899839 | 17423.9 |
| outer membrane protein assembly factor bamb, contains pqq-like beta-propeller repeat | SAMN04489864_102244 | Not Available | - | 899852 - 901693 | 68479.9 |
| imp dehydrogenase | SAMN04489864_102245 | Not Available | + | 902149 - 903618 | 52504.9 |
| hypothetical protein | SAMN04489864_102246 | Not Available | + | 903623 - 904207 | 21615.3 |
| hypothetical protein | SAMN04489864_102247 | Not Available | - | 904213 - 904944 | 28306.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.