Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methylmalonyl-coa epimerase | SAMN04489864_102218 | Not Available | + | 870423 - 870863 | 16656.3 |
| hypothetical protein | SAMN04489864_102219 | Not Available | + | 870913 - 871155 | 9009.94 |
| hypothetical protein | SAMN04489864_102220 | Not Available | + | 871175 - 871456 | 10802.8 |
| gamma-glutamyltranspeptidase / glutathione hydrolase | SAMN04489864_102221 | Not Available | + | 871765 - 873642 | 68591.3 |
| hypothetical protein | SAMN04489864_102222 | Not Available | + | 873662 - 874291 | 23678.9 |
| atp-binding cassette, subfamily f, member 3 | SAMN04489864_102223 | Not Available | - | 874481 - 876112 | 61803.2 |
| hypothetical protein | SAMN04489864_102224 | Not Available | - | 876105 - 876974 | 32222.6 |
| amidase | SAMN04489864_102225 | Not Available | - | 877296 - 878909 | 57325.9 |
| large subunit ribosomal protein l31 | SAMN04489864_102226 | Not Available | + | 879098 - 879346 | 9832.79 |
| udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase | SAMN04489864_102227 | Not Available | + | 879381 - 880589 | 45068.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.