Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| prolyl oligopeptidase family protein | SAMN04489864_102188 | Not Available | - | 834629 - 836887 | 86272.0 |
| predicted membrane protein | SAMN04489864_102189 | Not Available | + | 837137 - 837916 | 28481.7 |
| histidine kinase | SAMN04489864_102190 | Not Available | + | 837986 - 838981 | 37413.5 |
| two component transcriptional regulator, lyttr family | SAMN04489864_102191 | Not Available | + | 838959 - 839693 | 27646.6 |
| ribonuclease p protein component | SAMN04489864_102192 | Not Available | + | 839994 - 840389 | 15638.1 |
| hypothetical protein | SAMN04489864_102193 | Not Available | + | 840376 - 840606 | 8576.79 |
| trna threonylcarbamoyladenosine biosynthesis protein tsab | SAMN04489864_102194 | Not Available | + | 840661 - 841347 | 24800.1 |
| hypothetical protein | SAMN04489864_102195 | Not Available | - | 841344 - 842915 | 59354.7 |
| uncharacterized membrane protein ygdd, tmem256/duf423 family | SAMN04489864_102196 | Not Available | + | 843010 - 843396 | 14210.9 |
| replication restart dna helicase pria | SAMN04489864_102197 | Not Available | + | 843396 - 845873 | 93640.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.