Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04489864_102168 | Not Available | + | 813317 - 813847 | 19948.3 |
| metallo-beta-lactamase family protein | SAMN04489864_102169 | Not Available | - | 813859 - 815244 | 51392.1 |
| hypothetical protein | SAMN04489864_102170 | Not Available | - | 815342 - 815527 | 7148.58 |
| ymgg-like gly-zipper | SAMN04489864_102171 | Not Available | + | 815870 - 816334 | 16185.4 |
| hypothetical protein | SAMN04489864_102172 | Not Available | + | 816483 - 816860 | 14265.4 |
| hypothetical protein | SAMN04489864_102173 | Not Available | + | 816851 - 817693 | 32212.9 |
| trna dimethylallyltransferase | SAMN04489864_102174 | Not Available | + | 817693 - 818622 | 35292.2 |
| dna adenine methylase | SAMN04489864_102175 | Not Available | + | 818639 - 819766 | 44195.5 |
| outer membrane protein beta-barrel domain-containing protein | SAMN04489864_102176 | Not Available | + | 819866 - 820384 | 18055.3 |
| chey chemotaxis protein or a chey-like rec (receiver) domain | SAMN04489864_102177 | Not Available | - | 820425 - 820832 | 15430.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.