Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atpase components of abc transporters with duplicated atpase domains | SAMN04489864_102138 | Not Available | - | 777759 - 779381 | 61329.8 |
| hypothetical protein | SAMN04489864_102139 | Not Available | + | 779486 - 780052 | 22060.8 |
| nitroreductase | SAMN04489864_102140 | Not Available | + | 780100 - 780678 | 21984.5 |
| transcription elongation factor, grea/greb family | SAMN04489864_102141 | Not Available | + | 780726 - 781178 | 16859.2 |
| polysaccharide deacetylase | SAMN04489864_102142 | Not Available | - | 781274 - 782149 | 33204.0 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN04489864_102143 | Not Available | + | 782355 - 784859 | 95408.0 |
| zn-dependent amino-or carboxypeptidase, m28 family | SAMN04489864_102144 | Not Available | + | 784859 - 786514 | 60582.9 |
| hypothetical protein | SAMN04489864_102145 | Not Available | - | 786515 - 789022 | 94595.5 |
| outer membrane protein beta-barrel domain-containing protein | SAMN04489864_102146 | Not Available | - | 789042 - 789698 | 24692.3 |
| atp-dependent clp protease atp-binding subunit clpb | SAMN04489864_102147 | Not Available | - | 789838 - 792435 | 97162.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.