Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l-alanine-dl-glutamate epimerase | SAMN04489864_102128 | Not Available | - | 767164 - 768261 | 40598.1 |
| hypothetical protein | SAMN04489864_102129 | Not Available | + | 768379 - 770388 | 76720.7 |
| fkbp-type peptidyl prolyl cis-trans isomerase /apo-metallochaperone slyd | SAMN04489864_102130 | Not Available | + | 770399 - 770902 | 18009.2 |
| fur family transcriptional regulator, ferric uptake regulator | SAMN04489864_102131 | Not Available | - | 770948 - 771370 | 15612.8 |
| hypothetical protein | SAMN04489864_102132 | Not Available | - | 771373 - 771816 | 16395.4 |
| putative abc transport system permease protein | SAMN04489864_102133 | Not Available | - | 771955 - 773175 | 44702.8 |
| putative abc transport system atp-binding protein | SAMN04489864_102134 | Not Available | - | 773172 - 773801 | 22980.6 |
| predicted dehydrogenase | SAMN04489864_102135 | Not Available | + | 774143 - 775474 | 48976.2 |
| phosphotransferase enzyme family protein | SAMN04489864_102136 | Not Available | - | 775502 - 776566 | 41236.4 |
| transcriptional regulator, laci family | SAMN04489864_102137 | Not Available | - | 776664 - 777701 | 39085.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.