Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein, contains hepn domain | SAMN04489864_10158 | Not Available | + | 58869 - 59204 | 12793.4 |
| atp-dependent exodnase (exonuclease v) beta subunit (contains helicase and exonuclease domains) | SAMN04489864_10159 | Not Available | + | 59288 - 62506 | 121737.0 |
| hypothetical protein | SAMN04489864_10160 | Not Available | + | 62508 - 62792 | 10480.5 |
| pd-(d/e)xk nuclease superfamily protein | SAMN04489864_10161 | Not Available | + | 62792 - 65644 | 109116.0 |
| ribosomal-protein-alanine n-acetyltransferase | SAMN04489864_10162 | Not Available | + | 65765 - 66322 | 21520.9 |
| catechol 2,3-dioxygenase | SAMN04489864_10163 | Not Available | + | 66345 - 66698 | 13397.8 |
| pyruvate dehydrogenase e1 component beta subunit | SAMN04489864_10164 | Not Available | + | 66861 - 67847 | 35812.4 |
| hypothetical protein | SAMN04489864_10165 | Not Available | + | 67961 - 68380 | 15337.6 |
| hypothetical protein | SAMN04489864_10166 | Not Available | - | 68625 - 68810 | 6989.66 |
| hypothetical protein | SAMN04489864_10167 | Not Available | - | 68867 - 69271 | 15270.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.