Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phnb protein | SAMN04489864_102108 | Not Available | + | 743120 - 743557 | 16043.7 |
| protein of unknown function | SAMN04489864_102109 | Not Available | - | 743736 - 744020 | 10441.0 |
| hypothetical protein | SAMN04489864_102110 | Not Available | - | 744024 - 746840 | 107846.0 |
| eama-like transporter family protein | SAMN04489864_102111 | Not Available | - | 747355 - 748251 | 33483.9 |
| lipopolysaccharide export system permease protein | SAMN04489864_102112 | Not Available | - | 748251 - 749354 | 42172.1 |
| pp_00678 | SAMN04489864_102113 | Not Available | - | 749355 - 750485 | Not Available |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN04489864_102114 | Not Available | + | 750674 - 751795 | 43377.2 |
| 16s rrna m(7)g-527 methyltransferase | SAMN04489864_102115 | Not Available | + | 751798 - 752427 | 23860.8 |
| blar1 peptidase m56 | SAMN04489864_102116 | Not Available | - | 752434 - 754365 | 72993.1 |
| predicted transcriptional regulator | SAMN04489864_102117 | Not Available | - | 754362 - 754730 | 14246.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.