Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04489864_10288 | Not Available | + | 724905 - 725111 | 7388.34 |
| glyoxylase, beta-lactamase superfamily ii | SAMN04489864_10289 | Not Available | + | 725176 - 726075 | 33008.1 |
| cytochrome bd-i ubiquinol oxidase subunit 1 apoprotein | SAMN04489864_10290 | Not Available | + | 726181 - 727515 | 49177.3 |
| cytochrome bd-i ubiquinol oxidase subunit 2 apoprotein | SAMN04489864_10291 | Not Available | + | 727518 - 728522 | 37301.6 |
| ycii-related domain-containing protein | SAMN04489864_10292 | Not Available | - | 728529 - 728990 | 16682.5 |
| n-acetylmuramoyl-l-alanine amidase | SAMN04489864_10293 | Not Available | - | 729010 - 729744 | 26904.9 |
| acetyl-coa carboxylase carboxyl transferase subunit beta | SAMN04489864_10294 | Not Available | - | 729759 - 730604 | 31145.9 |
| fructose-bisphosphate aldolase | SAMN04489864_10295 | Not Available | + | 730812 - 731891 | 39806.3 |
| low affinity fe/cu permease | SAMN04489864_10296 | Not Available | + | 731981 - 732463 | 17934.5 |
| predicted n-acyltransferase, gnat family | SAMN04489864_10297 | Not Available | + | 732467 - 732892 | 16116.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.