Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ybbr-like protein | SAMN04489864_10278 | Not Available | + | 716976 - 717923 | 36719.9 |
| dephospho-coa kinase | SAMN04489864_10279 | Not Available | + | 717923 - 718531 | 22196.1 |
| putative mrna 3-end processing factor | SAMN04489864_10280 | Not Available | + | 718528 - 719469 | 35679.2 |
| hypothetical protein | SAMN04489864_10281 | Not Available | + | 719469 - 719648 | 6996.31 |
| dna-binding transcriptional regulator, marr family | SAMN04489864_10282 | Not Available | + | 719648 - 720097 | 17533.2 |
| zip zinc transporter | SAMN04489864_10283 | Not Available | - | 720098 - 720817 | 26590.0 |
| undecaprenyl-diphosphatase | SAMN04489864_10284 | Not Available | - | 720818 - 721381 | 21310.7 |
| methyltransferase domain-containing protein | SAMN04489864_10285 | Not Available | - | 721378 - 722109 | 28710.3 |
| phosphomannomutase | SAMN04489864_10286 | Not Available | + | 722283 - 723671 | 49966.0 |
| cysteine desulfurase | SAMN04489864_10287 | Not Available | + | 723696 - 724844 | 41949.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.