Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent rna helicase rhle | SAMN04489864_10268 | Not Available | + | 706309 - 707610 | 48691.3 |
| hypothetical protein | SAMN04489864_10269 | Not Available | + | 707653 - 708108 | 16900.9 |
| glycosyl hydrolases family 2, tim barrel domain | SAMN04489864_10270 | Not Available | - | 708115 - 709950 | 69388.9 |
| beta-lactamase class a | SAMN04489864_10271 | Not Available | - | 710236 - 711150 | 34316.5 |
| protein of unknown function | SAMN04489864_10272 | Not Available | - | 711279 - 711611 | 13197.2 |
| atp-binding cassette, subfamily b | SAMN04489864_10273 | Not Available | - | 711754 - 713538 | 67612.0 |
| leucine dehydrogenase | SAMN04489864_10274 | Not Available | + | 713983 - 715116 | 40876.3 |
| nusb antitermination factor | SAMN04489864_10275 | Not Available | + | 715159 - 716109 | 36807.5 |
| protein of unknown function | SAMN04489864_10276 | Not Available | + | 716113 - 716550 | 15458.8 |
| preprotein translocase subunit yajc | SAMN04489864_10277 | Not Available | + | 716589 - 716909 | 11478.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.