Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04489864_10258 | Not Available | - | 697128 - 697334 | 7645.07 |
| uncharacterized conserved protein ybbc, duf1343 family | SAMN04489864_10259 | Not Available | - | 697346 - 698578 | 45942.8 |
| lipoprotein-releasing system permease protein | SAMN04489864_10260 | Not Available | + | 698659 - 699873 | 45669.9 |
| trna pseudouridine38-40 synthase | SAMN04489864_10261 | Not Available | - | 699866 - 700669 | 31077.3 |
| dinb superfamily protein | SAMN04489864_10262 | Not Available | - | 700695 - 701156 | 17375.1 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN04489864_10263 | Not Available | - | 701170 - 701664 | 19337.5 |
| trehalose utilisation | SAMN04489864_10264 | Not Available | - | 701699 - 702523 | 31857.7 |
| dipeptidyl peptidase iv (dpp iv) n-terminal region | SAMN04489864_10265 | Not Available | - | 702628 - 705051 | 89176.4 |
| hypothetical protein | SAMN04489864_10266 | Not Available | - | 705153 - 705599 | 16210.0 |
| hypothetical protein | SAMN04489864_10267 | Not Available | - | 705610 - 706002 | 14992.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.