Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
1354377 bp
Thymine Count
1356728 bp
Guanine Count
858481 bp
Cytosine Count
818419 bp
Genome Length
4388005 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycerol-3-phosphate acyltransferase plsy | SAMN04489864_10238 | Not Available | + | 676959 - 677612 | 23304.2 |
| peptidase family m48 | SAMN04489864_10239 | Not Available | + | 677684 - 678505 | 29236.1 |
| para-aminobenzoate synthetase component 1 | SAMN04489864_10240 | Not Available | - | 678515 - 679768 | 46964.3 |
| adenylosuccinate synthetase | SAMN04489864_10241 | Not Available | - | 679862 - 681139 | 46875.6 |
| fur family transcriptional regulator, ferric uptake regulator | SAMN04489864_10242 | Not Available | - | 681178 - 681669 | 18895.6 |
| gtp pyrophosphokinase | SAMN04489864_10243 | Not Available | - | 681767 - 683980 | 83917.3 |
| protein of unknown function | SAMN04489864_10244 | Not Available | + | 684090 - 684707 | 23482.6 |
| glutathione peroxidase | SAMN04489864_10245 | Not Available | + | 684715 - 685221 | 19173.0 |
| bacillithiol biosynthesis deacetylase bshb1 | SAMN04489864_10246 | Not Available | + | 685224 - 685940 | 26805.2 |
| glutaryl-coa dehydrogenase | SAMN04489864_10247 | Not Available | + | 685952 - 687313 | 50091.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.