Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter insulae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter insulae
Accession NumberFOPP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3774 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytidylate kinase | SAMN04489864_10228 | Not Available | - | 667957 - 668646 | 26102.9 |
| ribosome-associated protein | SAMN04489864_10229 | Not Available | + | 668684 - 669091 | 15472.0 |
| hypothetical protein | SAMN04489864_10230 | Not Available | - | 669137 - 670087 | 35890.5 |
| atp-dependent lon protease | SAMN04489864_10231 | Not Available | - | 670091 - 672556 | 91927.6 |
| hypothetical protein | SAMN04489864_10232 | Not Available | - | 672608 - 672721 | 4328.38 |
| tpr repeat-containing protein | SAMN04489864_10233 | Not Available | + | 672816 - 673442 | 23639.4 |
| hypothetical protein | SAMN04489864_10234 | Not Available | - | 673435 - 673932 | 19101.2 |
| phosphoglycerate mutase | SAMN04489864_10235 | Not Available | - | 673962 - 675482 | 56229.0 |
| protein of unknown function | SAMN04489864_10236 | Not Available | + | 675617 - 676012 | 15218.5 |
| nicotinate-nucleotide pyrophosphorylase | SAMN04489864_10237 | Not Available | + | 676064 - 676906 | 30335.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.